Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 MIR661-201ENST00000384842 89 ntBASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RAB40ALP0C0E4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RAB40ALP0C0E4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC239800.4-201ENST00000603712 296 ntBASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC020765.3-201ENST00000613051 740 ntBASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AL138828.2-201ENST00000615812 383 ntBASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SPDYE12P-201ENST00000618416 771 ntBASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 AC106886.4-201ENST00000623557 2502 ntBASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RAB40ALP0C0E4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AC092068.3-201ENST00000587894 2016 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 AL391256.1-201ENST00000443260 1855 ntBASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RAB40ALP0C0E4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms