Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RB1P06400 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 AL442647.2-201ENST00000429864 857 ntBASIC17.22■□□□□ 0.35
RB1P06400 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 AL162726.2-201ENST00000438986 1017 ntBASIC17.22■□□□□ 0.35
RB1P06400 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 KLF2P4-201ENST00000451959 1225 ntBASIC17.22■□□□□ 0.35
RB1P06400 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.22■□□□□ 0.35
RB1P06400 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.22■□□□□ 0.35
RB1P06400 AC018665.1-201ENST00000622927 1362 ntBASIC17.22■□□□□ 0.35
RB1P06400 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.22■□□□□ 0.35
RB1P06400 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
RB1P06400 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.22■□□□□ 0.35
RB1P06400 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RB1P06400 KRT8P22-201ENST00000562317 1415 ntBASIC17.21■□□□□ 0.35
RB1P06400 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 ACTG1P3-201ENST00000431775 1114 ntBASIC17.21■□□□□ 0.35
RB1P06400 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.21■□□□□ 0.35
RB1P06400 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 MIR6869-201ENST00000619434 62 ntBASIC17.21■□□□□ 0.35
RB1P06400 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.21■□□□□ 0.35
RB1P06400 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RB1P06400 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.21■□□□□ 0.35
RB1P06400 Z97205.2-201ENST00000564697 1639 ntBASIC17.21■□□□□ 0.35
RB1P06400 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.21■□□□□ 0.35
RB1P06400 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RB1P06400 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RB1P06400 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RB1P06400 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 AL133373.2-201ENST00000623187 2828 ntBASIC17.2■□□□□ 0.34
RB1P06400 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 AC092068.3-201ENST00000587894 2016 ntBASIC17.2■□□□□ 0.34
RB1P06400 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RB1P06400 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.2■□□□□ 0.34
RB1P06400 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RB1P06400 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.2■□□□□ 0.34
RB1P06400 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.2■□□□□ 0.34
RB1P06400 AC036164.1-201ENST00000570544 333 ntBASIC17.2■□□□□ 0.34
RB1P06400 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.2■□□□□ 0.34
RB1P06400 RN7SL219P-201ENST00000582872 296 ntBASIC17.2■□□□□ 0.34
RB1P06400 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.2■□□□□ 0.34
RB1P06400 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.2■□□□□ 0.34
RB1P06400 MIR4321-201ENST00000592276 80 ntBASIC17.2■□□□□ 0.34
RB1P06400 AC133539.2-201ENST00000604757 467 ntBASIC17.2■□□□□ 0.34
RB1P06400 AL022328.1-201ENST00000610050 478 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms