Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.23■□□□□ 0.35
LMNAP02545 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.23■□□□□ 0.35
LMNAP02545 FAM58DP-201ENST00000428076 619 ntBASIC17.23■□□□□ 0.35
LMNAP02545 RBPMS2P1-201ENST00000437762 623 ntBASIC17.23■□□□□ 0.35
LMNAP02545 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.23■□□□□ 0.35
LMNAP02545 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 AC079140.1-201ENST00000508039 487 ntBASIC17.23■□□□□ 0.35
LMNAP02545 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.23■□□□□ 0.35
LMNAP02545 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LMNAP02545 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LMNAP02545 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LMNAP02545 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.23■□□□□ 0.35
LMNAP02545 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.23■□□□□ 0.35
LMNAP02545 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 AC097637.2-201ENST00000624096 1997 ntBASIC17.22■□□□□ 0.35
LMNAP02545 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 CU639417.3-201ENST00000624240 1404 ntBASIC17.22■□□□□ 0.35
LMNAP02545 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 SERBP1P5-201ENST00000510079 1181 ntBASIC17.22■□□□□ 0.35
LMNAP02545 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.22■□□□□ 0.35
LMNAP02545 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 CYP2T1P-202ENST00000641596 2535 ntBASIC17.22■□□□□ 0.35
LMNAP02545 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.22■□□□□ 0.35
LMNAP02545 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LMNAP02545 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.22■□□□□ 0.35
LMNAP02545 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 AL513523.2-202ENST00000427283 2040 ntBASIC17.21■□□□□ 0.35
LMNAP02545 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LMNAP02545 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 LINC00554-201ENST00000564841 3011 ntBASIC17.21■□□□□ 0.35
LMNAP02545 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LMNAP02545 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LMNAP02545 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.21■□□□□ 0.35
LMNAP02545 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LMNAP02545 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms