Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CD4P01730 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.03■□□□□ 0.48
CD4P01730 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.03■□□□□ 0.48
CD4P01730 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 AC098850.1-201ENST00000419919 790 ntBASIC18.03■□□□□ 0.48
CD4P01730 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.03■□□□□ 0.48
CD4P01730 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 AL589987.1-201ENST00000453380 819 ntBASIC18.03■□□□□ 0.48
CD4P01730 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CD4P01730 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.03■□□□□ 0.48
CD4P01730 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CD4P01730 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 TMEM14DP-201ENST00000422205 345 ntBASIC18.02■□□□□ 0.48
CD4P01730 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD4P01730 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CD4P01730 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.02■□□□□ 0.48
CD4P01730 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 AC123567.1-201ENST00000548294 1261 ntBASIC18.02■□□□□ 0.48
CD4P01730 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.02■□□□□ 0.48
CD4P01730 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.02■□□□□ 0.48
CD4P01730 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.02■□□□□ 0.48
CD4P01730 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD4P01730 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD4P01730 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD4P01730 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.02■□□□□ 0.47
CD4P01730 AL589702.1-201ENST00000641229 1509 ntBASIC18.02■□□□□ 0.47
CD4P01730 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD4P01730 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.02■□□□□ 0.47
CD4P01730 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.02■□□□□ 0.47
CD4P01730 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.02■□□□□ 0.47
CD4P01730 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD4P01730 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.01■□□□□ 0.47
CD4P01730 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.01■□□□□ 0.47
CD4P01730 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CD4P01730 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.01■□□□□ 0.47
CD4P01730 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CD4P01730 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.01■□□□□ 0.47
CD4P01730 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.01■□□□□ 0.47
CD4P01730 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 AC092658.1-201ENST00000505836 891 ntBASIC18.01■□□□□ 0.47
CD4P01730 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.01■□□□□ 0.47
CD4P01730 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
CD4P01730 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.01■□□□□ 0.47
CD4P01730 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 AL109936.8-201ENST00000641772 604 ntBASIC18.01■□□□□ 0.47
CD4P01730 AL139011.1-202ENST00000642063 584 ntBASIC18.01■□□□□ 0.47
CD4P01730 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms