Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.5■□□□□ 0.39
TIMP1P01033 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 RHOQP1-201ENST00000555758 579 ntBASIC17.5■□□□□ 0.39
TIMP1P01033 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 DUX4L45-201ENST00000566406 1057 ntBASIC17.5■□□□□ 0.39
TIMP1P01033 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.5■□□□□ 0.39
TIMP1P01033 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TIMP1P01033 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TIMP1P01033 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.5■□□□□ 0.39
TIMP1P01033 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 AC006033.1-201ENST00000440505 426 ntBASIC17.49■□□□□ 0.39
TIMP1P01033 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.49■□□□□ 0.39
TIMP1P01033 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.49■□□□□ 0.39
TIMP1P01033 CLUHP6-201ENST00000580789 941 ntBASIC17.49■□□□□ 0.39
TIMP1P01033 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TIMP1P01033 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TIMP1P01033 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TIMP1P01033 AC134312.5-201ENST00000568031 1313 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 RNF165-205ENST00000588679 2904 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 PCGF3-213ENST00000620529 1899 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.48■□□□□ 0.39
TIMP1P01033 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TIMP1P01033 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 AZGP1P1-201ENST00000411909 902 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.48■□□□□ 0.39
TIMP1P01033 AC012441.1-201ENST00000446669 685 ntBASIC17.48■□□□□ 0.39
TIMP1P01033 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TIMP1P01033 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.48■□□□□ 0.39
TIMP1P01033 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms