Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX2-2O95096 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.12■□□□□ 0.01
NKX2-2O95096 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SPDYE11-202ENST00000450699 704 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX2-2O95096 KRT8P48-201ENST00000515599 1220 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX2-2O95096 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SPDYE9P-201ENST00000570642 692 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SPDYE10P-202ENST00000612005 668 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SPDYE8P-202ENST00000612377 668 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 FOXO1B-201ENST00000504678 1527 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NKX2-2O95096 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NKX2-2O95096 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NKX2-2O95096 AC024909.3-201ENST00000611513 2257 ntBASIC15.12■□□□□ 0.01
NKX2-2O95096 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
NKX2-2O95096 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX2-2O95096 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 CROCCP1-201ENST00000426910 5675 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NKX2-2O95096 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NKX2-2O95096 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 SPCS2P4-201ENST00000436160 681 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.11■□□□□ 0.01
NKX2-2O95096 AC245100.5-201ENST00000452108 331 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.11■□□□□ 0.01
NKX2-2O95096 AC098859.1-201ENST00000502915 1238 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX2-2O95096 AC005829.1-201ENST00000570002 483 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.11■□□□□ 0.01
NKX2-2O95096 MIR4321-201ENST00000592276 80 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 SPTSSB-204ENST00000617024 1292 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.11■□□□□ 0.01
NKX2-2O95096 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NKX2-2O95096 AC022188.1-201ENST00000620960 1664 ntBASIC15.11■□□□□ 0.01
NKX2-2O95096 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms