Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.29□□□□□ -0.12
CCNKO75909 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.29□□□□□ -0.12
CCNKO75909 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCNKO75909 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CCNKO75909 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCNKO75909 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCNKO75909 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.28□□□□□ -0.12
CCNKO75909 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CCNKO75909 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 AC008687.5-201ENST00000593746 558 ntBASIC14.28□□□□□ -0.12
CCNKO75909 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.28□□□□□ -0.12
CCNKO75909 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
CCNKO75909 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCNKO75909 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
CCNKO75909 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.28□□□□□ -0.12
CCNKO75909 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.27□□□□□ -0.12
CCNKO75909 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCNKO75909 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCNKO75909 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.27□□□□□ -0.12
CCNKO75909 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.27□□□□□ -0.12
CCNKO75909 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CCNKO75909 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CCNKO75909 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCNKO75909 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNKO75909 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
CCNKO75909 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNKO75909 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.27□□□□□ -0.13
CCNKO75909 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCNKO75909 C1QBPP2-201ENST00000528754 825 ntBASIC14.27□□□□□ -0.13
CCNKO75909 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCNKO75909 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNKO75909 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CCNKO75909 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.27□□□□□ -0.13
CCNKO75909 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 AC097637.2-201ENST00000624096 1997 ntBASIC14.27□□□□□ -0.13
CCNKO75909 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.27□□□□□ -0.13
CCNKO75909 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCNKO75909 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms