Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CACNA1FO60840 AC114501.2-201ENST00000439631 535 ntBASIC20.38■□□□□ 0.85
CACNA1FO60840 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.38■□□□□ 0.85
CACNA1FO60840 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.38■□□□□ 0.85
CACNA1FO60840 MIR6069-201ENST00000620069 79 ntBASIC20.38■□□□□ 0.85
CACNA1FO60840 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.38■□□□□ 0.85
CACNA1FO60840 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.38■□□□□ 0.85
CACNA1FO60840 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CACNA1FO60840 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.37■□□□□ 0.85
CACNA1FO60840 CRB3P1-201ENST00000449338 276 ntBASIC20.37■□□□□ 0.85
CACNA1FO60840 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.37■□□□□ 0.85
CACNA1FO60840 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.37■□□□□ 0.85
CACNA1FO60840 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.37■□□□□ 0.85
CACNA1FO60840 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CACNA1FO60840 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.37■□□□□ 0.85
CACNA1FO60840 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.37■□□□□ 0.85
CACNA1FO60840 RNA5SP421-201ENST00000516864 134 ntBASIC20.37■□□□□ 0.85
CACNA1FO60840 AC044860.1-202ENST00000559481 777 ntBASIC20.37■□□□□ 0.85
CACNA1FO60840 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.37■□□□□ 0.85
CACNA1FO60840 AC009118.2-201ENST00000613275 655 ntBASIC20.37■□□□□ 0.85
CACNA1FO60840 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.37■□□□□ 0.85
CACNA1FO60840 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CACNA1FO60840 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.37■□□□□ 0.85
CACNA1FO60840 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CACNA1FO60840 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNA1FO60840 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNA1FO60840 AC112504.1-201ENST00000623415 1841 ntBASIC20.36■□□□□ 0.85
CACNA1FO60840 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC20.36■□□□□ 0.85
CACNA1FO60840 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CACNA1FO60840 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 AC236430.1-201ENST00000402231 743 ntBASIC20.36■□□□□ 0.85
CACNA1FO60840 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.36■□□□□ 0.85
CACNA1FO60840 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.36■□□□□ 0.85
CACNA1FO60840 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.36■□□□□ 0.85
CACNA1FO60840 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.36■□□□□ 0.85
CACNA1FO60840 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.36■□□□□ 0.85
CACNA1FO60840 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CACNA1FO60840 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CACNA1FO60840 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.36■□□□□ 0.85
CACNA1FO60840 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CACNA1FO60840 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CACNA1FO60840 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CACNA1FO60840 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CACNA1FO60840 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CACNA1FO60840 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CACNA1FO60840 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.35■□□□□ 0.85
CACNA1FO60840 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CACNA1FO60840 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CACNA1FO60840 FAM8A3P-201ENST00000427218 844 ntBASIC20.35■□□□□ 0.85
CACNA1FO60840 RASL12-203ENST00000434605 982 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms