Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
CTNND1O60716 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.06■□□□□ 0.64
CTNND1O60716 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.06■□□□□ 0.64
CTNND1O60716 AL162274.1-201ENST00000617191 1098 ntBASIC19.06■□□□□ 0.64
CTNND1O60716 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 AC060834.1-201ENST00000443027 2032 ntBASIC19.06■□□□□ 0.64
CTNND1O60716 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CTNND1O60716 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CTNND1O60716 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.06■□□□□ 0.64
CTNND1O60716 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNND1O60716 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CTNND1O60716 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CTNND1O60716 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
CTNND1O60716 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNND1O60716 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CTNND1O60716 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNND1O60716 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.05■□□□□ 0.64
CTNND1O60716 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNND1O60716 AC023310.3-201ENST00000557027 670 ntBASIC19.05■□□□□ 0.64
CTNND1O60716 AC100756.1-201ENST00000562736 682 ntBASIC19.05■□□□□ 0.64
CTNND1O60716 AC138749.3-201ENST00000567691 622 ntBASIC19.05■□□□□ 0.64
CTNND1O60716 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.05■□□□□ 0.64
CTNND1O60716 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.05■□□□□ 0.64
CTNND1O60716 AC116165.1-201ENST00000611806 668 ntBASIC19.05■□□□□ 0.64
CTNND1O60716 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CTNND1O60716 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CTNND1O60716 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CTNND1O60716 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNND1O60716 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTNND1O60716 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNND1O60716 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.04■□□□□ 0.64
CTNND1O60716 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.04■□□□□ 0.64
CTNND1O60716 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNND1O60716 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.04■□□□□ 0.64
CTNND1O60716 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNND1O60716 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 HILS1-202ENST00000545329 423 ntBASIC19.04■□□□□ 0.64
CTNND1O60716 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CTNND1O60716 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CTNND1O60716 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CTNND1O60716 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CTNND1O60716 AC106886.1-201ENST00000568660 600 ntBASIC19.04■□□□□ 0.64
CTNND1O60716 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.04■□□□□ 0.64
CTNND1O60716 AL603756.1-201ENST00000606511 2163 ntBASIC19.04■□□□□ 0.64
CTNND1O60716 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
CTNND1O60716 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.04■□□□□ 0.64
CTNND1O60716 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CTNND1O60716 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.03■□□□□ 0.64
CTNND1O60716 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CTNND1O60716 PCGF3-213ENST00000620529 1899 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms