Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE3O43900 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PRICKLE3O43900 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
PRICKLE3O43900 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 HLA-H-201ENST00000383620 1096 ntBASIC15.73■□□□□ 0.11
PRICKLE3O43900 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 AL118508.1-201ENST00000613502 2345 ntBASIC15.73■□□□□ 0.11
PRICKLE3O43900 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PRICKLE3O43900 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.73■□□□□ 0.11
PRICKLE3O43900 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 METTL21AP1-201ENST00000438852 635 ntBASIC15.72■□□□□ 0.11
PRICKLE3O43900 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC069262.1-201ENST00000539058 672 ntBASIC15.72■□□□□ 0.11
PRICKLE3O43900 MIR3197-201ENST00000582241 73 ntBASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC015911.4-201ENST00000588022 1070 ntBASIC15.72■□□□□ 0.11
PRICKLE3O43900 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.72■□□□□ 0.11
PRICKLE3O43900 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PRICKLE3O43900 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.71■□□□□ 0.11
PRICKLE3O43900 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
PRICKLE3O43900 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
PRICKLE3O43900 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PRICKLE3O43900 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRICKLE3O43900 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PRICKLE3O43900 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms