Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LDB2O43679 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 AC024909.3-201ENST00000611513 2257 ntBASIC16.4■□□□□ 0.22
LDB2O43679 AL603832.2-201ENST00000566195 2125 ntBASIC16.4■□□□□ 0.22
LDB2O43679 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LDB2O43679 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LDB2O43679 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LDB2O43679 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.4■□□□□ 0.22
LDB2O43679 AL589702.1-201ENST00000641229 1509 ntBASIC16.4■□□□□ 0.22
LDB2O43679 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LDB2O43679 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
LDB2O43679 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
LDB2O43679 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 MKNK2P1-201ENST00000437526 628 ntBASIC16.39■□□□□ 0.21
LDB2O43679 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 ALG1L5P-201ENST00000482043 771 ntBASIC16.39■□□□□ 0.21
LDB2O43679 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.39■□□□□ 0.21
LDB2O43679 AC243562.1-201ENST00000560672 389 ntBASIC16.39■□□□□ 0.21
LDB2O43679 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 CROCCP1-201ENST00000426910 5675 ntBASIC16.39■□□□□ 0.21
LDB2O43679 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.39■□□□□ 0.21
LDB2O43679 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LDB2O43679 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LDB2O43679 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.39■□□□□ 0.21
LDB2O43679 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
LDB2O43679 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
LDB2O43679 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.38■□□□□ 0.21
LDB2O43679 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.38■□□□□ 0.21
LDB2O43679 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 HTR5BP-201ENST00000430851 1154 ntBASIC16.38■□□□□ 0.21
LDB2O43679 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 FAM86C2P-203ENST00000528684 1004 ntBASIC16.38■□□□□ 0.21
LDB2O43679 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.38■□□□□ 0.21
LDB2O43679 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.38■□□□□ 0.21
LDB2O43679 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.38■□□□□ 0.21
LDB2O43679 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.38■□□□□ 0.21
LDB2O43679 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
LDB2O43679 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 FOXO1B-201ENST00000504678 1527 ntBASIC16.38■□□□□ 0.21
LDB2O43679 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LDB2O43679 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms