Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC27.53■■■□□ 2
CUX2O14529 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 AL671710.1-201ENST00000610245 2349 ntBASIC27.53■■■□□ 2
CUX2O14529 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC27.53■■■□□ 2
CUX2O14529 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC27.53■■■□□ 2
CUX2O14529 AC093724.1-201ENST00000448659 1027 ntBASIC27.53■■■□□ 2
CUX2O14529 HSPB1P2-201ENST00000448722 546 ntBASIC27.53■■■□□ 2
CUX2O14529 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC27.53■■■□□ 2
CUX2O14529 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC27.53■■■□□ 2
CUX2O14529 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
CUX2O14529 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC27.53■■■□□ 2
CUX2O14529 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CUX2O14529 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC27.53■■■□□ 2
CUX2O14529 SNX33P1-201ENST00000592116 1762 ntBASIC27.53■■■□□ 2
CUX2O14529 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC27.52■■■□□ 2
CUX2O14529 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CUX2O14529 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
CUX2O14529 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC27.52■■■□□ 2
CUX2O14529 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC27.52■■■□□ 2
CUX2O14529 AC093433.1-201ENST00000458048 571 ntBASIC27.52■■■□□ 2
CUX2O14529 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC27.52■■■□□ 2
CUX2O14529 RPL13AP25-201ENST00000484130 612 ntBASIC27.52■■■□□ 2
CUX2O14529 AC022137.2-201ENST00000503482 481 ntBASIC27.52■■■□□ 2
CUX2O14529 COX5BP1-201ENST00000507622 393 ntBASIC27.52■■■□□ 2
CUX2O14529 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC27.52■■■□□ 2
CUX2O14529 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
CUX2O14529 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC27.52■■■□□ 2
CUX2O14529 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC27.52■■■□□ 2
CUX2O14529 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC27.52■■■□□ 2
CUX2O14529 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC27.52■■■□□ 2
CUX2O14529 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC27.51■■■□□ 2
CUX2O14529 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC27.51■■■□□ 2
CUX2O14529 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC27.51■■■□□ 2
CUX2O14529 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC27.51■■■□□ 2
CUX2O14529 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
CUX2O14529 CTBP2P4-201ENST00000513884 920 ntBASIC27.51■■■□□ 2
CUX2O14529 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC27.51■■■□□ 2
CUX2O14529 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC27.51■■■□□ 2
CUX2O14529 CYGB-203ENST00000589145 788 ntTSL 3 BASIC27.51■■■□□ 2
CUX2O14529 AC073352.2-201ENST00000609385 439 ntBASIC27.51■■■□□ 2
CUX2O14529 AC145423.3-201ENST00000615987 467 ntBASIC27.51■■■□□ 2
CUX2O14529 COX6A1P2-201ENST00000620597 330 ntBASIC27.51■■■□□ 2
CUX2O14529 AC138951.2-201ENST00000623455 1161 ntBASIC27.51■■■□□ 2
CUX2O14529 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC27.51■■■□□ 2
CUX2O14529 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CUX2O14529 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CUX2O14529 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC27.51■■□□□ 1.99
CUX2O14529 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CUX2O14529 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 USE1-206ENST00000595101 1776 ntTSL 2 BASIC27.51■■□□□ 1.99
CUX2O14529 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 C1QBPP1-201ENST00000400117 770 ntBASIC27.51■■□□□ 1.99
CUX2O14529 FO393414.2-201ENST00000405153 598 ntBASIC27.51■■□□□ 1.99
CUX2O14529 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC27.51■■□□□ 1.99
CUX2O14529 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CUX2O14529 AC098935.1-201ENST00000446057 611 ntBASIC27.51■■□□□ 1.99
CUX2O14529 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC27.51■■□□□ 1.99
CUX2O14529 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC27.51■■□□□ 1.99
CUX2O14529 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CUX2O14529 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC27.5■■□□□ 1.99
CUX2O14529 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC27.5■■□□□ 1.99
CUX2O14529 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC27.5■■□□□ 1.99
CUX2O14529 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC27.5■■□□□ 1.99
CUX2O14529 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CUX2O14529 AL139010.1-201ENST00000454878 894 ntBASIC27.5■■□□□ 1.99
CUX2O14529 AC135983.4-201ENST00000564116 1262 ntBASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms