Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 MIR6080-201ENST00000617359 66 ntBASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AL603756.1-201ENST00000606511 2163 ntBASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 AC008677.1-201ENST00000519230 1561 ntBASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPIPA2E9PIF3 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AC107890.1-201ENST00000422478 521 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 SPDYE14P-201ENST00000442619 822 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 RNA5SP421-201ENST00000516864 134 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AL138918.1-201ENST00000568306 659 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AC051619.7-201ENST00000568314 623 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 AL390955.2-201ENST00000603032 514 ntBASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.97□□□□□ -0.01
NPIPA2E9PIF3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 KRT18P34-201ENST00000488218 1270 ntBASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 INGX-202ENST00000489074 768 ntBASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 ALG1L8P-201ENST00000533887 760 ntBASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.96□□□□□ -0.01
NPIPA2E9PIF3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms