Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
CAPN8A6NHC0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 MKNK2P1-201ENST00000437526 628 ntBASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 YBX1P5-201ENST00000509441 847 ntBASIC16.72■□□□□ 0.27
CAPN8A6NHC0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AC190387.1-201ENST00000551683 408 ntBASIC16.72■□□□□ 0.27
CAPN8A6NHC0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AC099522.2-201ENST00000607001 744 ntBASIC16.72■□□□□ 0.27
CAPN8A6NHC0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 AL512652.2-201ENST00000625156 1716 ntBASIC16.72■□□□□ 0.27
CAPN8A6NHC0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
CAPN8A6NHC0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 AC092902.6-201ENST00000641783 218 ntBASIC16.71■□□□□ 0.27
CAPN8A6NHC0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.71■□□□□ 0.27
CAPN8A6NHC0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CAPN8A6NHC0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CAPN8A6NHC0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.7■□□□□ 0.26
CAPN8A6NHC0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms