Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 AP001889.1-201ENST00000525414 633 ntBASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
PLEKHD1A6NEE1 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 TP73-213ENST00000604479 1623 ntTSL 5 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 PKIG-203ENST00000372887 769 ntTSL 3 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 AP000812.2-201ENST00000538934 718 ntBASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 NOC2LP2-201ENST00000407594 1944 ntBASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
PLEKHD1A6NEE1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 BCYRN1-201ENST00000418539 200 ntBASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 FAM21FP-201ENST00000426241 1131 ntBASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 AC068587.3-201ENST00000526613 355 ntBASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 PTP4A1P2-201ENST00000546033 454 ntBASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC24.89■■□□□ 1.58
PLEKHD1A6NEE1 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC24.89■■□□□ 1.57
PLEKHD1A6NEE1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 GGT3P-204ENST00000453783 1664 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 KRT8P37-201ENST00000451609 1420 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 TARDBPP1-201ENST00000442013 1203 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC108725.1-201ENST00000495472 409 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC124283.3-201ENST00000570869 594 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC060834.1-201ENST00000443027 2032 ntBASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC24.88■■□□□ 1.57
PLEKHD1A6NEE1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC24.87■■□□□ 1.57
PLEKHD1A6NEE1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms