Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 AL136982.4-201ENST00000437689 1740 ntBASIC14.32□□□□□ -0.12
MBD3L3A6NE82 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
MBD3L3A6NE82 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 UBALD1-205ENST00000590891 2641 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC093004.1-201ENST00000508850 424 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 DOC2GP-202ENST00000514950 1163 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 API5-211ENST00000534695 560 ntTSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CR383656.12-201ENST00000549567 513 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AL596325.1-201ENST00000563991 1082 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AC140912.1-201ENST00000577171 1054 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.31□□□□□ -0.12
MBD3L3A6NE82 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
MBD3L3A6NE82 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 AC087499.6-201ENST00000411576 835 ntBASIC14.3□□□□□ -0.12
MBD3L3A6NE82 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 RN7SL692P-201ENST00000464677 288 ntBASIC14.3□□□□□ -0.12
MBD3L3A6NE82 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.3□□□□□ -0.12
MBD3L3A6NE82 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms