Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AC105233.2-201ENST00000523697 349 ntBASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AF228730.5-201ENST00000530288 346 ntBASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AC010327.4-202ENST00000591484 748 ntBASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.78□□□□□ -0.04
HDGFL3Q9Y3E1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HDGFL3Q9Y3E1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AC112482.1-201ENST00000492080 688 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 KRT8P23-201ENST00000560090 1207 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AC243562.1-201ENST00000560672 389 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 MIR4469-201ENST00000583919 79 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 AC005052.1-201ENST00000625181 2492 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 MTHFR-217ENST00000641820 1569 ntBASIC14.77□□□□□ -0.05
HDGFL3Q9Y3E1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 KRT18P13-201ENST00000400056 1290 ntBASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 TIMM8BP1-201ENST00000452384 211 ntBASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AC027307.2-201ENST00000591252 911 ntBASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HDGFL3Q9Y3E1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms