Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 FLJ38576-201ENST00000623820 2459 ntBASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RPH3AQ9Y2J0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AL671277.1-201ENST00000429656 993 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 YBX1P5-201ENST00000509441 847 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SNHG9-202ENST00000564014 471 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 AC099522.2-201ENST00000607001 744 ntBASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RPH3AQ9Y2J0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms