Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 FO538757.1-201ENST00000623083 1397 ntBASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM35Q9UPQ4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 AC125807.1-201ENST00000483097 614 ntBASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 CYP2T1P-202ENST00000641596 2535 ntBASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM35Q9UPQ4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 TREML5P-201ENST00000421694 576 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 AC107890.1-201ENST00000422478 521 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 AL353705.2-201ENST00000428243 662 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 AC067863.1-201ENST00000494933 530 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 AC097493.3-201ENST00000509725 367 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 SPDYE12P-201ENST00000618416 771 ntBASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM35Q9UPQ4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM35Q9UPQ4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
TRIM35Q9UPQ4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRIM35Q9UPQ4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 AL355385.1-201ENST00000606123 409 ntBASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TRIM35Q9UPQ4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms