Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC106827.1-201ENST00000366454 431 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 BCAS2P2-201ENST00000425064 674 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 REXO1L8P-201ENST00000604378 1897 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 IL9RP3-201ENST00000442856 1674 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 BAX-205ENST00000391871 687 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AL590235.1-201ENST00000564650 861 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 MBP-238ENST00000580402 915 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AP000356.3-201ENST00000382243 753 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 RNA5SP410-201ENST00000516285 106 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 MPDU1-223ENST00000582151 728 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AL157384.1-201ENST00000445995 2473 ntBASIC6.54□□□□□ -1.36
MACF1Q9UPN3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RNLS-203ENST00000437752 525 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC026410.3-201ENST00000514280 936 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC079178.1-201ENST00000420915 656 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 GDNF-207ENST00000515058 764 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC018846.1-201ENST00000568231 183 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AL161938.1-201ENST00000569833 2180 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 NDUFS6P1-201ENST00000485187 316 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 AC242376.2-201ENST00000619355 883 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A7P-201ENST00000382628 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A23P-201ENST00000400136 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A21P-201ENST00000510875 1396 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A15P-201ENST00000514465 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A6P-201ENST00000515148 1394 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A16P-201ENST00000526662 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A9P-201ENST00000527940 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A5P-201ENST00000528738 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A14P-201ENST00000530386 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM90A13P-201ENST00000534703 1395 ntBASIC6.53□□□□□ -1.36
MACF1Q9UPN3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms