Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 HLA-J-202ENST00000469281 1241 ntBASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 AC025678.2-201ENST00000562061 970 ntBASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 AC092364.2-201ENST00000596710 2692 ntBASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC00895-201ENST00000629028 1637 ntBASIC16.67■□□□□ 0.26
NCKIPSDQ9NZQ3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AC011467.4-201ENST00000594891 528 ntBASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AC027612.4-201ENST00000605371 583 ntBASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 AC105339.1-204ENST00000636249 355 ntBASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 PCDHA1-201ENST00000378133 2726 ntBASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKIPSDQ9NZQ3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKIPSDQ9NZQ3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms