Protein–RNA interactions for Protein: Q9NX08

COMMD8, COMM domain-containing protein 8, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8Q9NX08 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 HLA-V-204ENST00000476601 1289 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AC097493.3-201ENST00000509725 367 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AC105021.1-202ENST00000570572 669 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AL390955.2-201ENST00000603032 514 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AL096865.1-201ENST00000606796 927 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AC026979.3-201ENST00000607315 403 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 AC084018.2-201ENST00000613093 2607 ntBASIC17.11■□□□□ 0.33
COMMD8Q9NX08 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COMMD8Q9NX08 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 TREML5P-201ENST00000421694 576 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 SPCS2P1-201ENST00000561636 679 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 RN7SL828P-201ENST00000607615 303 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 AC073592.8-201ENST00000624126 511 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 FO538757.1-201ENST00000623083 1397 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 AC124067.4-201ENST00000519691 2379 ntBASIC17.1■□□□□ 0.33
COMMD8Q9NX08 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
COMMD8Q9NX08 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 MIR4321-201ENST00000592276 80 ntBASIC17.09■□□□□ 0.33
COMMD8Q9NX08 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
COMMD8Q9NX08 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
COMMD8Q9NX08 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms