Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.71■□□□□ 0.11
CCM2LQ9NUG4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 AL512652.2-201ENST00000625156 1716 ntBASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.71■□□□□ 0.1
CCM2LQ9NUG4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 POM121L3P-201ENST00000419331 1163 ntBASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 HMGN1P19-201ENST00000436976 333 ntBASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 AL139424.1-201ENST00000607572 797 ntBASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCM2LQ9NUG4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 AC139887.3-201ENST00000568585 713 ntBASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 AL031731.1-201ENST00000642131 2094 ntBASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCM2LQ9NUG4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 REXO1L8P-201ENST00000604378 1897 ntBASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CCM2LQ9NUG4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms