Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SCAF1Q9H7N4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AL096828.2-201ENST00000567259 1965 ntBASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC007967.3-201ENST00000434308 558 ntBASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC097478.2-201ENST00000610572 514 ntBASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
SCAF1Q9H7N4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 TREML5P-201ENST00000421694 576 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AC107890.1-201ENST00000422478 521 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 RHOQP3-201ENST00000437982 621 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 GPR53P-205ENST00000457298 1084 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AC125807.1-201ENST00000483097 614 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AL662799.1-202ENST00000614205 422 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 SIGLEC16-201ENST00000599858 1437 ntBASIC24.68■■□□□ 1.54
SCAF1Q9H7N4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SCAF1Q9H7N4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SCAF1Q9H7N4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms