Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SSBP3Q9BWW4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AL139400.1-201ENST00000366220 510 ntBASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 PCDHB19P-201ENST00000570871 2371 ntBASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SSBP3Q9BWW4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SSBP3Q9BWW4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms