Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 SLC25A3P1-201ENST00000443844 931 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AL359075.1-203ENST00000462729 1002 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 STK19B-204ENST00000512515 211 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 MIR3908-201ENST00000579798 126 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 PCDHA3-202ENST00000532566 4594 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AC023157.3-201ENST00000619086 2088 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 AC097376.2-205ENST00000610159 5334 ntBASIC12.5□□□□□ -0.41
SSBP4Q9BWG4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 Z83836.1-201ENST00000624605 1642 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 LIN28AP1-201ENST00000429574 405 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 GUSBP12-201ENST00000513727 720 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 RN7SL718P-201ENST00000581254 303 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 AC139749.1-202ENST00000617529 3139 ntBASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP4Q9BWG4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SSBP4Q9BWG4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms