Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 AC013467.2-201ENST00000605472 835 ntBASIC17.36■□□□□ 0.37
GCNAQ96QF7 AL390754.1-201ENST00000619088 582 ntBASIC17.36■□□□□ 0.37
GCNAQ96QF7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
GCNAQ96QF7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.36■□□□□ 0.37
GCNAQ96QF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 FO538757.1-201ENST00000623083 1397 ntBASIC17.36■□□□□ 0.37
GCNAQ96QF7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.36■□□□□ 0.37
GCNAQ96QF7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GCNAQ96QF7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GCNAQ96QF7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GCNAQ96QF7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC142381.1-201ENST00000426099 345 ntBASIC17.34■□□□□ 0.37
GCNAQ96QF7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.34■□□□□ 0.37
GCNAQ96QF7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC073389.1-201ENST00000595595 795 ntBASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC092053.1-201ENST00000605787 1936 ntBASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GCNAQ96QF7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GCNAQ96QF7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GCNAQ96QF7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCNAQ96QF7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCNAQ96QF7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCNAQ96QF7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GCNAQ96QF7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
GCNAQ96QF7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms