Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ECHDC3Q96DC8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 KLF2P3-201ENST00000451977 1087 ntBASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 BANF1P1-201ENST00000553684 263 ntBASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ECHDC3Q96DC8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 AL353705.2-201ENST00000428243 662 ntBASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 AC106028.4-201ENST00000614509 607 ntBASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ECHDC3Q96DC8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.35■□□□□ 0.21
ECHDC3Q96DC8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms