Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 AC005034.1-201ENST00000426657 489 ntBASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 SPDYE12P-201ENST00000618416 771 ntBASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A1Q93050 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A1Q93050 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 AL035252.4-201ENST00000624174 288 ntBASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
ATP6V0A1Q93050 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MRPS18AP1-201ENST00000414458 589 ntBASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 SERBP1P5-201ENST00000510079 1181 ntBASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AL138828.2-201ENST00000615812 383 ntBASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 AL589702.1-201ENST00000641229 1509 ntBASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0A1Q93050 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 AC063926.2-201ENST00000623766 1308 ntBASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP6V0A1Q93050 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms