Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 AL162726.2-201ENST00000438986 1017 ntBASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 AC093525.8-201ENST00000624099 1342 ntBASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC25.25■■□□□ 1.63
CFAP43Q8NDM7 LINC01144-201ENST00000626198 1710 ntBASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 FAM21FP-201ENST00000426241 1131 ntBASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 AC026979.3-201ENST00000607315 403 ntBASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CFAP43Q8NDM7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 AZGP1P1-201ENST00000411909 902 ntBASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 KLF2P4-201ENST00000451959 1225 ntBASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 APRT-204ENST00000563655 709 ntTSL 5 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC25.23■■□□□ 1.63
CFAP43Q8NDM7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 CDC14C-201ENST00000428251 1719 ntBASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CFAP43Q8NDM7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 FO681548.1-201ENST00000455617 1132 ntBASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC25.21■■□□□ 1.63
CFAP43Q8NDM7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms