Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 METTL21AP1-201ENST00000438852 635 ntBASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 AC069335.1-201ENST00000489972 472 ntBASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 AC093520.2-201ENST00000561830 333 ntBASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 LINC01225-203ENST00000563550 1244 ntBASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH20Q8N6Y1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 RNF216P1-203ENST00000404404 2427 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC006538.1-201ENST00000567905 1585 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC092171.3-201ENST00000610122 2651 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 TSEN15P1-201ENST00000423257 515 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 PMS2P2-201ENST00000425039 1128 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC027307.2-201ENST00000591252 911 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC009093.7-201ENST00000623853 1223 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AL512652.2-201ENST00000625156 1716 ntBASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH20Q8N6Y1 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 KRT18P32-201ENST00000424695 1287 ntBASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH20Q8N6Y1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms