Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AC067863.1-201ENST00000494933 530 ntBASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 RNA5SP410-201ENST00000516285 106 ntBASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 MIR4321-201ENST00000592276 80 ntBASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 AL390955.2-201ENST00000603032 514 ntBASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.45■□□□□ 0.06
ARHGEF39Q8N4T4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 FAM86GP-201ENST00000448322 971 ntBASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 KLF2P3-201ENST00000451977 1087 ntBASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AL133215.2-201ENST00000609242 977 ntBASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 AC106028.4-201ENST00000614509 607 ntBASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.44■□□□□ 0.06
ARHGEF39Q8N4T4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 DUX4L27-201ENST00000554796 1261 ntBASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 AC140878.1-201ENST00000565277 250 ntBASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 AC024267.1-201ENST00000582320 895 ntBASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
ARHGEF39Q8N4T4 AL365330.1-201ENST00000607459 531 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms