Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SYNPOQ8N3V7 AC011676.5-201ENST00000624864 2660 ntBASIC16.64■□□□□ 0.26
SYNPOQ8N3V7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 SPDYE19P-201ENST00000338590 713 ntBASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AC114501.2-201ENST00000439631 535 ntBASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 GNAQP1-201ENST00000444815 1067 ntBASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AC010336.2-201ENST00000564226 506 ntBASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 IGHV3-72-202ENST00000621503 303 ntBASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.64■□□□□ 0.25
SYNPOQ8N3V7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AC124067.4-201ENST00000519691 2379 ntBASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 LINC02012-201ENST00000608206 1725 ntBASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SYNPOQ8N3V7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 SPDYE17-201ENST00000412399 783 ntBASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SYNPOQ8N3V7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms