Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
VPS8Q8N3P4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC004987.2-201ENST00000395959 1148 ntBASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 SERBP1P5-201ENST00000510079 1181 ntBASIC25.37■■□□□ 1.65
VPS8Q8N3P4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC006449.5-201ENST00000610658 2098 ntBASIC25.37■■□□□ 1.65
VPS8Q8N3P4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC25.37■■□□□ 1.65
VPS8Q8N3P4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 AC134407.2-201ENST00000625089 1978 ntBASIC25.36■■□□□ 1.65
VPS8Q8N3P4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 KRT8P37-201ENST00000451609 1420 ntBASIC25.36■■□□□ 1.65
VPS8Q8N3P4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 ZBTB45P2-201ENST00000452245 1531 ntBASIC25.36■■□□□ 1.65
VPS8Q8N3P4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 AC008761.3-201ENST00000624803 892 ntBASIC25.36■■□□□ 1.65
VPS8Q8N3P4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
VPS8Q8N3P4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 SPTLC1P1-201ENST00000447199 261 ntBASIC25.35■■□□□ 1.65
VPS8Q8N3P4 TSPY16P-201ENST00000449843 468 ntBASIC25.35■■□□□ 1.65
VPS8Q8N3P4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
VPS8Q8N3P4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 CYP2T1P-202ENST00000641596 2535 ntBASIC25.34■■□□□ 1.65
VPS8Q8N3P4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
VPS8Q8N3P4 CALY-202ENST00000368555 783 ntTSL 2 BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms