Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AL513477.1-201ENST00000602865 2407 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC092474.2-201ENST00000424288 719 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC140658.5-201ENST00000438532 169 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC074386.1-202ENST00000463561 864 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC092865.6-201ENST00000642101 219 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 AC092919.2-201ENST00000623631 1645 ntBASIC15.54■□□□□ 0.08
CCDC116Q8IYX3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 POU5F1P6-201ENST00000466990 990 ntBASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 AC005622.1-201ENST00000636801 1703 ntBASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 AL391005.1-201ENST00000623953 2435 ntBASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 C8orf49-201ENST00000525043 1968 ntBASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC116Q8IYX3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.52■□□□□ 0.08
CCDC116Q8IYX3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms