Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC080080.1-201ENST00000625121 2420 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC114501.2-201ENST00000439631 535 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 TPRX2P-201ENST00000535362 881 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AC024267.1-201ENST00000582320 895 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 SRD5A3P1-201ENST00000603021 949 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 AL033527.5-202ENST00000641632 1098 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEFF1Q8IYR6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 MYCLP2-201ENST00000449268 967 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 RN7SL837P-201ENST00000463010 287 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC055876.2-201ENST00000531834 546 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 AC004461.2-201ENST00000629517 803 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PCDHB17P-201ENST00000539533 2393 ntBASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEFF1Q8IYR6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEFF1Q8IYR6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms