Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 AC008894.3-201ENST00000624324 3103 ntBASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB11FIP4Q86YS3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 AC005622.1-201ENST00000636801 1703 ntBASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 WASH6P-202ENST00000359512 1437 ntBASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 TIMM8BP1-201ENST00000452384 211 ntBASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 RARRES2P8-201ENST00000566335 367 ntBASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB11FIP4Q86YS3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 TFAMP1-201ENST00000412727 736 ntBASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 AC023511.2-201ENST00000618803 211 ntBASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB11FIP4Q86YS3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 UPF3AP3-201ENST00000420996 769 ntBASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 KRT18P34-201ENST00000488218 1270 ntBASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 AC005829.1-201ENST00000570002 483 ntBASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB11FIP4Q86YS3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms