Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRRTM4Q86VH4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 FAM86GP-201ENST00000448322 971 ntBASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC067863.1-201ENST00000494933 530 ntBASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRTM4Q86VH4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 RFPL4AP1-201ENST00000530883 850 ntBASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 AC024267.1-201ENST00000582320 895 ntBASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 AC015911.4-201ENST00000588022 1070 ntBASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 AC106028.4-201ENST00000614509 607 ntBASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.09■□□□□ 0.17
LRRTM4Q86VH4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRTM4Q86VH4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.08■□□□□ 0.17
LRRTM4Q86VH4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LRRTM4Q86VH4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRRTM4Q86VH4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms