Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 AZGP1P1-201ENST00000411909 902 ntBASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 GPAA1P2-201ENST00000417923 928 ntBASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KRT28Q7Z3Y7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 FTH1P14-201ENST00000482930 551 ntBASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 AC124283.3-201ENST00000570869 594 ntBASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 PCGF3-213ENST00000620529 1899 ntBASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
KRT28Q7Z3Y7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AC134915.1-201ENST00000426461 574 ntBASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AC243960.2-201ENST00000600996 747 ntBASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
KRT28Q7Z3Y7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
KRT28Q7Z3Y7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KRT28Q7Z3Y7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.89■■□□□ 1.1
KRT28Q7Z3Y7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 RPL13AP20-201ENST00000459725 609 ntBASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 AC010328.2-201ENST00000597698 1111 ntBASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KRT28Q7Z3Y7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.88■■□□□ 1.09
KRT28Q7Z3Y7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT28Q7Z3Y7 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KRT28Q7Z3Y7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms