Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AC092474.2-201ENST00000424288 719 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AC109635.5-201ENST00000533593 962 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 BX640515.1-201ENST00000617215 977 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AC007064.4-201ENST00000637740 555 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AC092919.2-201ENST00000623631 1645 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AL603832.2-201ENST00000566195 2125 ntBASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF549Q6P9A3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 AC140658.5-201ENST00000438532 169 ntBASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 AC008894.3-201ENST00000624324 3103 ntBASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF549Q6P9A3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 AC022188.1-201ENST00000620960 1664 ntBASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 AL513190.1-201ENST00000621254 727 ntBASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF549Q6P9A3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms