Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.37□□□□□ -0.27
CCDC144NLQ6NUI1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 GGT4P-201ENST00000623672 1708 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 SPDYE11-202ENST00000450699 704 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 CEND1P1-201ENST00000451006 455 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 SPDYE9P-201ENST00000570642 692 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC010327.4-202ENST00000591484 748 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 SPDYE10P-202ENST00000612005 668 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 SPDYE8P-202ENST00000612377 668 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC079781.4-201ENST00000641908 219 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 AC016027.1-202ENST00000607927 1699 ntBASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CCDC144NLQ6NUI1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 TFAMP1-201ENST00000412727 736 ntBASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 AL135744.1-201ENST00000565098 629 ntBASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 AC099522.2-201ENST00000607001 744 ntBASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 AC026120.1-201ENST00000611536 926 ntBASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
CCDC144NLQ6NUI1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms