Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF43Q68DV7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AC092053.1-201ENST00000605787 1936 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AC069262.1-201ENST00000539058 672 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AL009183.1-201ENST00000603760 355 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 AL035252.4-201ENST00000624174 288 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF43Q68DV7 OR6D1P-203ENST00000641209 4860 ntBASIC17.27■□□□□ 0.36
RNF43Q68DV7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF43Q68DV7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF43Q68DV7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF43Q68DV7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RNF43Q68DV7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RNF43Q68DV7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 RNU1-129P-201ENST00000384064 167 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 FAM86GP-201ENST00000448322 971 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 AC087641.1-201ENST00000557561 1021 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 U1.21-201ENST00000580816 167 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 AC005498.2-205ENST00000593218 784 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 AC131009.4-201ENST00000624048 1740 ntBASIC17.26■□□□□ 0.35
RNF43Q68DV7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF43Q68DV7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF43Q68DV7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 TUBB7P-202ENST00000428444 1305 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms