Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL359711.2-201ENST00000563105 872 ntBASIC14.03□□□□□ -0.16
LRRK2Q5S007 MIR4741-201ENST00000579822 90 ntBASIC14.03□□□□□ -0.16
LRRK2Q5S007 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 AC245884.6-201ENST00000515672 1067 ntBASIC14.03□□□□□ -0.16
LRRK2Q5S007 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 AL136301.1-201ENST00000615830 422 ntBASIC14.03□□□□□ -0.16
LRRK2Q5S007 AP003419.4-201ENST00000616071 517 ntBASIC14.03□□□□□ -0.16
LRRK2Q5S007 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LRRK2Q5S007 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LRRK2Q5S007 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.02□□□□□ -0.16
LRRK2Q5S007 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.02□□□□□ -0.16
LRRK2Q5S007 TOMM22P5-201ENST00000416399 439 ntBASIC14.02□□□□□ -0.16
LRRK2Q5S007 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 CLUHP6-201ENST00000580789 941 ntBASIC14.02□□□□□ -0.16
LRRK2Q5S007 COX6A1P2-201ENST00000620597 330 ntBASIC14.02□□□□□ -0.16
LRRK2Q5S007 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.02□□□□□ -0.16
LRRK2Q5S007 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LRRK2Q5S007 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRK2Q5S007 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRK2Q5S007 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRK2Q5S007 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LRRK2Q5S007 MIR1227-201ENST00000408484 88 ntBASIC14.02□□□□□ -0.17
LRRK2Q5S007 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 SPTLC1P5-201ENST00000450718 252 ntBASIC14.02□□□□□ -0.17
LRRK2Q5S007 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 AC244452.3-201ENST00000636814 210 ntBASIC14.02□□□□□ -0.17
LRRK2Q5S007 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LRRK2Q5S007 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LRRK2Q5S007 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 LINC01115-203ENST00000606068 577 ntBASIC14.01□□□□□ -0.17
LRRK2Q5S007 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 AL136982.4-201ENST00000437689 1740 ntBASIC14.01□□□□□ -0.17
LRRK2Q5S007 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.01□□□□□ -0.17
LRRK2Q5S007 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LRRK2Q5S007 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms