Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 MIR346-201ENST00000362234 95 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC142381.1-201ENST00000426099 345 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 KRT8P23-201ENST00000560090 1207 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AP000842.3-202ENST00000569238 1080 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC022145.2-201ENST00000598203 171 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AL513210.1-201ENST00000629608 234 ntBASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PRICKLE4Q2TBC4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 AL513523.2-202ENST00000427283 2040 ntBASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.27■□□□□ 0.03
PRICKLE4Q2TBC4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 AL592309.1-201ENST00000443127 649 ntBASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 AC098859.1-201ENST00000502915 1238 ntBASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 IGHV3-62-201ENST00000520057 340 ntBASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SPTSSB-204ENST00000617024 1292 ntBASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
PRICKLE4Q2TBC4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRICKLE4Q2TBC4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms