Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 AC004790.1-201ENST00000612686 536 ntBASIC19.53■□□□□ 0.72
PDS5AQ29RF7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 AGGF1P2-201ENST00000426656 2106 ntBASIC19.53■□□□□ 0.72
PDS5AQ29RF7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 REXO1L8P-201ENST00000604378 1897 ntBASIC19.53■□□□□ 0.72
PDS5AQ29RF7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.53■□□□□ 0.72
PDS5AQ29RF7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AC005225.4-201ENST00000557330 545 ntBASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AC104794.3-201ENST00000566840 1248 ntBASIC19.52■□□□□ 0.72
PDS5AQ29RF7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AC004233.3-201ENST00000607794 1269 ntBASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AC012645.4-201ENST00000610691 1061 ntBASIC19.52■□□□□ 0.72
PDS5AQ29RF7 AL662799.1-202ENST00000614205 422 ntBASIC19.52■□□□□ 0.72
PDS5AQ29RF7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.52■□□□□ 0.72
PDS5AQ29RF7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PDS5AQ29RF7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC243562.2-201ENST00000561247 970 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC092337.1-201ENST00000568699 1129 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC025048.3-201ENST00000590609 569 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC005702.4-201ENST00000618393 416 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 DFFBP1-201ENST00000433250 979 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDS5AQ29RF7 AC025048.6-201ENST00000634326 1161 ntBASIC19.51■□□□□ 0.71
PDS5AQ29RF7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms