Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL1Q00532 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 U1.21-201ENST00000580816 167 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.22■□□□□ 0.19
CDKL1Q00532 Z83851.2-201ENST00000609564 659 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CDKL1Q00532 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 PCGF3-213ENST00000620529 1899 ntBASIC16.22■□□□□ 0.19
CDKL1Q00532 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDKL1Q00532 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDKL1Q00532 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDKL1Q00532 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 AC126177.1-201ENST00000547829 2218 ntBASIC16.21■□□□□ 0.19
CDKL1Q00532 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.21■□□□□ 0.19
CDKL1Q00532 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
CDKL1Q00532 AL513480.1-201ENST00000451731 511 ntBASIC16.21■□□□□ 0.19
CDKL1Q00532 POU5F1P6-201ENST00000466990 990 ntBASIC16.21■□□□□ 0.19
CDKL1Q00532 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL1Q00532 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL1Q00532 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.21■□□□□ 0.19
CDKL1Q00532 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 AC021097.1-201ENST00000607902 574 ntBASIC16.21■□□□□ 0.19
CDKL1Q00532 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDKL1Q00532 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDKL1Q00532 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.21■□□□□ 0.19
CDKL1Q00532 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CDKL1Q00532 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL1Q00532 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CDKL1Q00532 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL1Q00532 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL1Q00532 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL1Q00532 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDKL1Q00532 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.21■□□□□ 0.18
CDKL1Q00532 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.21■□□□□ 0.18
CDKL1Q00532 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 PKD1P5-201ENST00000532415 10291 ntBASIC16.2■□□□□ 0.18
CDKL1Q00532 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.2■□□□□ 0.18
CDKL1Q00532 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDKL1Q00532 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 PMS2P4-201ENST00000412466 1052 ntBASIC16.2■□□□□ 0.18
CDKL1Q00532 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CDKL1Q00532 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.2■□□□□ 0.18
CDKL1Q00532 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.2■□□□□ 0.18
CDKL1Q00532 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDKL1Q00532 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CDKL1Q00532 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms