Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PRYP5-201ENST00000451909 266 ntBASIC14.49□□□□□ -0.09
SEC61A1P61619 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC117500.6-201ENST00000624871 588 ntBASIC14.49□□□□□ -0.09
SEC61A1P61619 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.49□□□□□ -0.09
SEC61A1P61619 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC104109.2-201ENST00000602919 1418 ntBASIC14.49□□□□□ -0.09
SEC61A1P61619 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC126755.1-201ENST00000525846 6405 ntBASIC14.48□□□□□ -0.09
SEC61A1P61619 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 MIR574-201ENST00000385209 96 ntBASIC14.48□□□□□ -0.09
SEC61A1P61619 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SEC61A1P61619 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
SEC61A1P61619 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.48□□□□□ -0.09
SEC61A1P61619 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 SIGLEC30P-201ENST00000455569 941 ntBASIC14.48□□□□□ -0.09
SEC61A1P61619 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.48□□□□□ -0.09
SEC61A1P61619 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 AC106730.1-201ENST00000566722 1090 ntBASIC14.48□□□□□ -0.09
SEC61A1P61619 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SEC61A1P61619 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SEC61A1P61619 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.48□□□□□ -0.09
SEC61A1P61619 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.47□□□□□ -0.09
SEC61A1P61619 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 SLC25A1P3-201ENST00000395415 828 ntBASIC14.47□□□□□ -0.09
SEC61A1P61619 MIR940-201ENST00000401276 94 ntBASIC14.47□□□□□ -0.09
SEC61A1P61619 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SEC61A1P61619 RNA5SP415-201ENST00000517246 115 ntBASIC14.47□□□□□ -0.09
SEC61A1P61619 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.47□□□□□ -0.09
SEC61A1P61619 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.47□□□□□ -0.09
SEC61A1P61619 AL356488.2-201ENST00000602755 427 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms