Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.03■□□□□ -0
CXCR4P61073 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CXCR4P61073 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CXCR4P61073 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CXCR4P61073 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.03■□□□□ -0
CXCR4P61073 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CXCR4P61073 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CXCR4P61073 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CXCR4P61073 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CXCR4P61073 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.02■□□□□ -0
CXCR4P61073 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.02■□□□□ -0
CXCR4P61073 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.02■□□□□ -0
CXCR4P61073 TSSC2-201ENST00000450217 709 ntBASIC15.02■□□□□ -0
CXCR4P61073 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CXCR4P61073 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.02■□□□□ -0
CXCR4P61073 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.02■□□□□ -0
CXCR4P61073 AL590326.2-201ENST00000625139 305 ntBASIC15.02■□□□□ -0
CXCR4P61073 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.02□□□□□ -0.01
CXCR4P61073 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CXCR4P61073 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CXCR4P61073 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CXCR4P61073 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 NSUN5P1-202ENST00000421140 1535 ntBASIC15.02□□□□□ -0.01
CXCR4P61073 NSUN5P2-203ENST00000457352 1529 ntBASIC15.02□□□□□ -0.01
CXCR4P61073 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
CXCR4P61073 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CXCR4P61073 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 AC004817.3-201ENST00000602957 2129 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CXCR4P61073 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 SPDYE21P-201ENST00000413323 827 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 DRAXINP1-201ENST00000437611 948 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 KRT17P6-201ENST00000453795 1220 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 TOB2P1-201ENST00000469761 992 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 TPSP2-201ENST00000561760 610 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.01□□□□□ -0.01
CXCR4P61073 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 AP000867.4-201ENST00000641616 219 ntBASIC15.01□□□□□ -0.01
CXCR4P61073 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.01□□□□□ -0.01
CXCR4P61073 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.01□□□□□ -0.01
CXCR4P61073 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CXCR4P61073 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms