Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HIST1H2BDP58876 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 AL356441.2-201ENST00000443009 864 ntBASIC12.38□□□□□ -0.43
HIST1H2BDP58876 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H2BDP58876 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 AL031432.3-201ENST00000607698 485 ntBASIC12.37□□□□□ -0.43
HIST1H2BDP58876 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 SLC22A20-204ENST00000530038 1673 ntBASIC12.37□□□□□ -0.43
HIST1H2BDP58876 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H2BDP58876 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms