Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
GFRA1P56159 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
GFRA1P56159 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.68□□□□□ -0.06
GFRA1P56159 TREML5P-201ENST00000421694 576 ntBASIC14.68□□□□□ -0.06
GFRA1P56159 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.68□□□□□ -0.06
GFRA1P56159 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.68□□□□□ -0.06
GFRA1P56159 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 BANF1P1-201ENST00000553684 263 ntBASIC14.68□□□□□ -0.06
GFRA1P56159 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.68□□□□□ -0.06
GFRA1P56159 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.68□□□□□ -0.06
GFRA1P56159 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.68□□□□□ -0.06
GFRA1P56159 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.68□□□□□ -0.06
GFRA1P56159 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GFRA1P56159 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GFRA1P56159 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 PRORSD1P-202ENST00000563365 2154 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 AC005052.1-201ENST00000625181 2492 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 AC097493.3-201ENST00000509725 367 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.67□□□□□ -0.06
GFRA1P56159 AC105021.1-202ENST00000570572 669 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 AL365330.1-201ENST00000607459 531 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
GFRA1P56159 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.67□□□□□ -0.06
GFRA1P56159 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.67□□□□□ -0.06
GFRA1P56159 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
GFRA1P56159 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
GFRA1P56159 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
GFRA1P56159 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 AL592424.1-201ENST00000563624 1536 ntBASIC14.66□□□□□ -0.06
GFRA1P56159 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
GFRA1P56159 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
GFRA1P56159 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.66□□□□□ -0.06
GFRA1P56159 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.66□□□□□ -0.06
GFRA1P56159 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.66□□□□□ -0.06
GFRA1P56159 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 AC092580.3-201ENST00000430932 139 ntBASIC14.66□□□□□ -0.06
GFRA1P56159 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.66□□□□□ -0.06
GFRA1P56159 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.66□□□□□ -0.06
GFRA1P56159 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
GFRA1P56159 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.66□□□□□ -0.06
GFRA1P56159 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms